WashU Epigenome Browser

Gateway to the epigenome. (Art by Ting Wang)

Contents:

• Use the Browser
  • The Top Menu
  • Genomic Region Locator
  • Operations in the Tracks View Container
  • Settings
  • Apps
  • Track management
  • Track Customization
  • Circlet view for chromatin interaction tracks
• Tracks
  • Configure your webserver to enable CORS
  • Prepare track files
  • Annotation Tracks
  • Numerical Tracks
  • Read Alignment BAM Tracks
  • Methylation tracks
  • Categorical tracks
  • Long range chromatin interaction
• Datahub
  • Example data hub
  • Example bigWig track
  • Example methylC track
  • Example categorical track
  • Example longrange track
  • Example bigInteract track
  • Example repeatmasker track
  • Example geneAnnotation track
  • Example bigbed track
  • Example bed track
  • Example refbed track
  • Example HiC track
  • Example cool track
  • Example genomealign track
  • Example Ruler track
  • Track properties
• Installation
  • Setup
  • Start the browser
  • Setup your own backend API (optional)
• Embedding
• Frontend code architeture
  • Quick tour
  • Suggested order of reading
  • Making a new track type
  • Performance tips
  • React (and other) gotchas
  • Lessons trying to refactor into WebWorkers
• Contact us
  • Source code and issue tracker
  • Get help on social media

Indices and tables

• Index
• Search Page